BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029H11SP1|AL429136
(809 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 757 0.0
>3x_Contig1800
Length = 38778
Score = 757 bits (380), Expect = 0.0
Identities = 416/430 (96%), Gaps = 1/430 (0%)
Strand = Plus / Plus
Query: 1 atctaaggcccaactcctcaactttgtggtttctggtgttgcccaatttgttaatcaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12608 atctaaggcccaactcctcaactttgtggtttctggtgttgcccaatttgttaatcaatt 12667
Query: 61 tgctactccaaaggcaatgaagnatatcnaatattggttctatgtgttctacgntttctt 120
|||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 12668 tgctactccaaaggcaatgaagaatatcaaatattggttctatgtgttctacgttttctt 12727
Query: 121 cgatattttcgaatttattgttatctacttcttcttcgttgaaactatagggtanaagct 180
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 12728 cgatattttcgaatttattgttatctacttcttcttcgttgaaacta-agggtagaagct 12786
Query: 181 tagaagnattagaagntgtctttgaagctccaaacccaagaaaggcatccgttgatcaag 240
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12787 tagaagaattagaagttgtctttgaagctccaaacccaagaaaggcatccgttgatcaag 12846
Query: 241 cattcttggctcaagtcagggcaactttggtccaacgaaatgacgttagagttgcaaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12847 cattcttggctcaagtcagggcaactttggtccaacgaaatgacgttagagttgcaaatg 12906
Query: 301 ctcaaaatttgaaagagcaagagcctctaaagagcgatgctgatcntgtcgaaaagcttt 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 12907 ctcaaaatttgaaagagcaagagcctctaaagagcgatgctgatcatgtcgaaaagcttt 12966
Query: 361 cagnggcngaatctgtttattgccatcttttcaataaattttgttaggtncaagaagttt 420
||| ||| ||||||||||| ||||||||||||||| |||||||||||| ||||||||||
Sbjct: 12967 cagaggcagaatctgtttaaagccatcttttcaatatattttgttaggtgcaagaagttt 13026
Query: 421 ccgtacttca 430
||||||||||
Sbjct: 13027 ccgtacttca 13036
Score = 391 bits (196), Expect = e-108
Identities = 322/356 (90%), Gaps = 12/356 (3%)
Strand = Plus / Plus
Query: 454 gatcttctcmtaattgcagcaaaaagtctwgtggnnttcatcaawtaaaacagccacarg 513
||||||||| ||||||||||||||||||| |||| |||||||| ||||| ||||||| |
Sbjct: 13059 gatcttctcctaattgcagcaaaaagtcttgtggaattcatcaattaaaa-agccacagg 13117
Query: 514 ctttagaactcttaatggattattcttaacagntactgttagacgttagcacatgggccg 573
||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 13118 ctttaga-ctcttaatggattattct-aacagttactgttagacgttagcacatgggccg 13175
Query: 574 gtatgtcattgnagtacgtttaamttgcctgaattgggnaaaagtattgacctttgaagc 633
||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 13176 gtatgtcattgaagtacgtttaaattgcctgaattggg-aaaagtattgacctttg-agc 13233
Query: 634 ccgggntgcataccgccttgcgtaatcangntttggcaccggttttcccagcaacgcatg 693
| || |||||||||||||||| || | |||||| ||||||||||||| |||||||
Sbjct: 13234 c--ggttgcataccgccttgcggtatgcag-tttggc-tcggttttcccagc-acgcatg 13288
Query: 694 tgggcaatcattttccacacgtgtgaaccctcgggcggttaatgtgngcatttaggatcg 753
||||| |||| ||||||||||||||||||||||| | | |||||| |||||||||||||
Sbjct: 13289 tgggc-atca-tttccacacgtgtgaaccctcggcagttaaatgtgtgcatttaggatcg 13346
Query: 754 gctaatagttgtttttagcttcagcttcagmtcatcggattttgtgaaacatataa 809
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 13347 gctaatagttgtttttagcttcagcttcagctcatcggattttgtgaaacatataa 13402
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4222
Number of Sequences: 1807
Number of extensions: 4222
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 809
length of database: 10,358,551
effective HSP length: 16
effective length of query: 793
effective length of database: 10,329,639
effective search space: 8191403727
effective search space used: 8191403727
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)